Cyprinodon_variegatusFamily: RRM_5 Number of Genes: 29
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
zcrb1
snrpa
pabpc1b
rbm4.3 (1 of many)
rbm4.3 (1 of many)
si:ch1073-335m2.2
snrpb2
rbm14b
ELAVL2
elavl3
ptbp1a
-
-
-
-
elavl1a
ptbp2b
hnrnpr
-
elavl4
pabpc4
rbm4.1
syncripl
hnrnpl
-
-
-
HNRNPLL
pabpc1a
-

Introduction

Pfam

The RRM motif is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins.

InterPro

No InterPro abstract

Reference

  1. Birney E., Kumar S., Krainer A.R. , Nucleic Acid Res 1993;21:5803-5816.: Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. PUBMED:8290338 EPMC:8290338.