Amphiprion_ocellarisFamily: MMR_HSR1 Number of Genes: 190
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
rab5aa
mxb
gtpbp4
arl11
sept2
-
-
-
-
rab22a
arf2b
-
-
-
-
rab12
-
rab6ba
rraga
-
-
RAB15 (1 of many)
-
si:dkey-37o8.1
arl8ba
arl13b
crygn2
-
arfrp1
-
-
rab25a
ARL6
sept3
rab1ba
rab23
-
-
arl2
rasl11b
-
RAB7A
rab33ba
rab15
sar1b
rab35b
-
zgc:162879
-
guf1
rab1ab
EHD2
dnajc27
drg1
mtg2
rasl11a
arl3l2
rab34b
-
mfn2
rab33a
rhebl1
arf3b
-
srl
-
-
RAB39B
rabl2
-
-
SEPT4
-
-
-
gnl1
rab14
mfn1b
-
-
-
-
sept8a
eefsec
si:dkey-98f17.5
si:ch211-197g15.10
-
gtpbp3
-
arl8a
si:cabz01085950.1
dnm1l
rheb
arl5c
RAP2B
-
rab6bb
mtif2
-
-
-
-
-
-
sept6
rasef
-
rasl10a
-
RAB9A (1 of many)
-
hrasb
rabl3
zgc:153654
rasd4
nkiras2
-
-
-
-
-
rab30
-
OLA1
-
-
gnl3
rab42a
arl1
-
-
-
rab9a
-
rab18b
gtpbp10
-
-
arl5a
-
-
-
nkiras1
sept7b
si:ch211-11k18.4
gfm2
gnl2
eral1
rab2a
-
-
gtpbp6
-
zgc:63587
sept5a
-
-
eef2b
rab11al
rab25b
sept4a
-
-
-
-
lsg1
-
-
-
-
rab18a
ehd1a
sept8b
-
rab5c
si:dkey-16l2.16
SRL (1 of many)
-
mtg1
srprb
kras
-
sept9b
rab11ba
-
rab11bb
rab36
eif5b
rab34a
-
-
-
ola1
sept5b
cracr2b
-
-
rab11a
gnl3l
arl8
si:dkey-13a21.4
opa1
-
noa1
-
-
-
sar1ab
drg2
arl3
RAB41
si:rp71-84d19.3
-
si:dkey-73p2.1
-
rab9b
cracr2ab
-
-
-
-
arf5
-
sept9a
-
-
arl13a
arl8bb
zgc:101559
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.