Anabas_testudineusFamily: MMR_HSR1 Number of Genes: 231
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
arl5c
gtpbp10
sept3
-
-
-
rabl2
-
-
nkiras2
rab5c
arf3b
si:dkey-37o8.1
ehd3
rab1ba
rab2a
-
eefsec
arfrp1
RAB7A (1 of many)
-
-
rab18b
ARF5
-
rab36
zgc:171927
-
rhot1b
sar1ab
arl5a
rabl3
arl4aa
-
-
-
sept9b
-
arl3
rasd4
-
-
sept7b
hbs1l
rab9b
-
-
arl8
si:ch211-11k18.4
si:cabz01085950.1
drg2
sept8b
arl1
-
si:rp71-84d19.3
-
eral1
zgc:162879
rab25b
rab11al
sept5b
eif5b (1 of many)
rab34b
si:dkey-98f17.5
sept15
sept12
-
zgc:101559
sept4a
-
rab1ab
arl3l2
zgc:153654
-
-
nkiras1
dnajc27
rab42a
-
arl8bb
gnl2
-
-
ola1
SRL (1 of many)
arf2b
gnl3l
RAB39B
mfn1b
-
-
cracr2b
rab30
SEPT4
si:dkey-34d22.5
rasl10a
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
sept8a
rab20
eif5b (1 of many)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
lsg1
-
-
-
-
-
-
-
-
rab6bb
-
rraga
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rabl6b
-
-
-
-
-
gtpbp4
gtpbp6
-
sar1b
-
-
-
-
rab35b
rab9a
ehd1a
si:ch211-113e8.5
srprb
-
-
-
rasl11a
rab5aa
rab25a
si:dkey-13a21.4
rasef
mtif2
ehd4
-
OLA1
eef2b
-
mtg2
rab41
arl2
rab33ba
-
-
-
-
-
-
-
-
-
-
RAB7A (1 of many)
-
CRACR2A
drg1
gtpbp3
arl13b
-
-
rab11bb
rab33a
cracr2ab
arl13a
guf1
dnm1l
RAB9A (1 of many)
-
-
-
rab14
sept6
noa1
-
-
-
rab15
si:dkey-16l2.16
arl4cb
sept2
-
-
rab12
-
hrasb
rheb
-
-
-
zgc:113625
zgc:63587
sept5a
gnl1
rab23
kras
arl8a
rab18a
mtg1
-
rab11a
-
-
-
rab34a
-
-
-
-
-
-
rab11ba
-
gnl3
srl
-
-
sept9a
RAB29
arl8ba
mfn2
rab22a

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.