Scleropages_formosusFamily: RRM_5 Number of Genes: 32
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
SNRPB2 (1 of many)
ELAVL2
hnrnpr
-
zcrb1
snrpa
pabpc1a
hnrnpl
si:ch1073-335m2.2 (1 of many)
-
ptbp2b
HNRNPLL
-
safb
srsf5
PTBP2
si:ch1073-335m2.2 (1 of many)
snrpb2
SYNCRIP (1 of many)
a1cf
rbm4.3
elavl4
pabpc1l
-
elavl2
zgc:77262
-
ptbp1
ELAVL1
-
sf1
syncrip
pabpc4
elavl3
rbm14b

Introduction

Pfam

The RRM motif is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins.

InterPro

No InterPro abstract

Reference

  1. Birney E., Kumar S., Krainer A.R. , Nucleic Acid Res 1993;21:5803-5816.: Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. PUBMED:8290338 EPMC:8290338.