Astyanax_mexicanusFamily: RRM_5 Number of Genes: 31
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
ptbp2b
elavl4
hnrnpl
ptbp3
-
ptbp1a
-
elavl1b
-
rbm14a
pabpc1b
matr3l1.1 (1 of many)
-
-
sltm
spen
pabpc1l
hnrnpl2
rbm19
safb
-
pabpc4
ptbp1b
srsf5a
elavl1a
rbm14b
snrpa
ptbp2a
rbm4.1
-
ELAVL2
rbm7
snrpb2
rbm4.3
-
elavl3

Introduction

Pfam

The RRM motif is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins.

InterPro

No InterPro abstract

Reference

  1. Birney E., Kumar S., Krainer A.R. , Nucleic Acid Res 1993;21:5803-5816.: Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. PUBMED:8290338 EPMC:8290338.