Petromyzon_marinusFamily: MMR_HSR1 Number of Genes: 64
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
rab5c (1 of many)
-
-
-
-
-
rheb
-
gtpbp4
-
gnl2
-
-
-
rab5c (1 of many)
-
-
-
SEPT9 (1 of many)
-
rasef
-
rab1ba
-
sept15 (1 of many)
-
-
-
arf1
-
arl1
-
nkiras2 (1 of many)
-
SEPT9 (1 of many)
-
zgc:162239
-
rasl10a
-
sar1b
-
-
-
gtpbp10
-
rab20
-
eif5b
-
hrasb
-
-
-
DRG2
-
rab36
-
mtg1
-
arl2
-
srl
-
GUK1 (1 of many)
-
rab18b
-
mtif2
-
rab27a
-
-
-
dnajc27
-
-
-
rab30
-
-
-
nkiras2 (1 of many)
-
si:dkey-98f17.5 (1 of many)
-
gtpbp6
-
-
-
si:cabz01085950.1
-
eefsec
-
-
-
arl8
-
rab33ba
-
lsg1
-
arl8ba
-
rab5c (1 of many)
-
si:dkey-98f17.5 (1 of many)
-
eral1
-
RAB2B (1 of many)
-
sept15 (1 of many)
-
rhebl1
-
-
-
-
-
arf4a
-
ARL4A (1 of many)
-
ARF6
-
ARL4A (1 of many)
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.