Stegastes_partitusFamily: MMR_HSR1 Number of Genes: 241
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
sept5b
arl3l2
OLA1
zgc:63587
-
-
-
mxb
eefsec
-
-
-
-
-
-
-
-
-
-
-
-
sept2
RAB29
-
-
rasef
-
-
mfn1b
-
-
RAP2B
-
-
-
rab34b
mtif2
-
-
-
-
-
-
gtpbp10
-
-
-
-
gtpbp3
-
-
-
rab33ba
SEPT4
-
-
eif5b
-
ehd4
lsg1
arl8ba
-
-
arl11
rab33a
-
-
-
-
rheb
-
-
-
-
rab41
si:dkey-16l2.16
zgc:101559
rab5c
-
-
nkiras2
SEPT7 (1 of many)
-
-
-
-
-
hrasb
-
arf2b
arl5c
rab9a
-
-
crygn2
rab35b
arl4aa
-
ehd1a (1 of many)
sept4a
srprb
arl13a
dnajc27
sar1ab
mfn2
rab6bb
rasl10a
-
arl3
rab9b
-
kras
rraga
sept6
-
-
rab23
arl4cb
-
zgc:162879
ehd1a (1 of many)
-
si:ch211-11k18.4
guf1
RAB39B (1 of many)
rab12
-
si:dkey-32e23.4
-
-
-
-
rab11bb
-
-
rabl3
-
-
-
-
rab11al
dnm1l
rab25b
CRACR2A
sept8b
-
noa1
arl8
arf3b
sept8a
-
drg2
rhebl1
-
si:rp71-84d19.3
-
-
-
-
-
-
si:dkey-34d22.5
-
-
ehd3
rab30
-
sept3
zgc:171927
-
-
si:dkey-37o8.1
-
-
-
-
-
SRL (1 of many)
-
-
arf5
sept7b
arl14
-
-
-
-
arl1
-
-
zgc:113625
-
-
-
-
-
rasl11b
sept9a
rab15
-
-
-
-
rab1ab
-
-
-
-
-
-
-
-
-
sept5a
-
rab5aa
arl5a
rab25a
-
-
-
-
-
arl8a
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rab42a
-
arl13b
-
-
rab11ba
arl2
gtpbp6 (1 of many)
-
rab34a
rab6ba
gtpbp6 (1 of many)
gnl2
-
ARL6
gnl1
sept15
-
-
sar1b
-
-
-
-
zgc:153654
ehd2b
rab36
eral1
opa1
nkiras1
-
-
si:dkey-98f17.5
mtg2
si:cabz01085950.1
srl
-
-
-
-
-
-
-
-
RAB11A
-
-
-
-
-
gnl3
-
-
-
-
-
-
arl8bb
rab18b
-
rabl6b
ola1
rab22a
gnl3l
sept9b
rasd4
-
-
-
mtg1
cracr2ab
-
-
-
rab1ba
-
rab14
drg1
RAB15 (1 of many)
RAB7A
rasl11a

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.