Cyprinodon_variegatusFamily: DEAD Number of Genes: 68
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
ddx10
ddx31
-
-
ifih1
ddx6
skiv2l
eif4a2
ddx28
tdrd12
-
-
-
dhx29
mtrex
cmss1
hfm1
-
-
-
ddx52
dhx36
ddx24
-
dhx8
dhx30
-
ddx56
ddx55
eif4a3
dhx16
tdrd9
DDX39A
recql4
-
smarca5
zgc:193690
dhx9
dhx58
ddx43
-
zgc:158828
ddx49
si:dkey-156n14.5
-
-
ddx42
DHX15
dhx57
ddx27
ddx59
ddx19
ascc3
DDX41
recql
ddx20
recql5
-
-
-
ddx23
ddx51
-
blm
snrnp200
ddx18
ddx5
dhx37
ddx21
dhx40
eif4a1b
polq
dicer1
helq
-
ddx1
YTHDC2
ddx54
ddx46
dhx38

Introduction

Pfam

Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

InterPro

Proteins with this domain include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

Reference

  1. de la Cruz J, Kressler D, Linder P; , Trends Biochem Sci 1999;24:192-198.: Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. PUBMED:10322435 EPMC:10322435 .

  2. Aubourg S, Kreis M, Lecharny A; , Nucleic Acids Res 1999;27:628-636.: The DEAD box RNA helicase family in Arabidopsis thaliana. PUBMED:9862990 EPMC:9862990.