Caenorhabditis_elegansFamily: MMR_HSR1 Number of Genes: 60
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
arc-1
-
arf-1.2
-
arf-3
-
arl-1
-
arl-3
-
arl-5
-
arl-8
-
arl-6
-
drp-1
-
eat-3
-
eef-2
-
evl-20
-
fzo-1
-
let-60
-
ngp-1
-
nst-1
-
rab-1
-
rab-5
-
rab-6.1
-
rab-6.2
-
rab-7
-
rab-11.1
-
rab-11.2
-
rab-14
-
rab-18
-
rab-21
-
rab-30
-
rab-35
-
rab-39
-
rap-3
-
rme-1
-
raga-1
-
unc-59
-
unc-108
-
4R79.2
-
efsc-1
-
E02H1.2
-
mtcu-1
-
F46B6.4
-
F46B6.6
-
rheb-1
-
M01E5.2
-
R186.3
-
T28D6.6
-
ola-1
-
Y48E1B.2
-
C02F5.3
-
C26E6.12
-
rsef-1
-
C52B11.5
-
C53H9.2
-
K02E10.1
-
nog-1
-
Y54E10BR.2
-
iffb-1
-
Y67D2.4
-
Y71H2AM.12
-
Y119D3B.14
-
sar-1
-
ZK1236.1
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.