Oreochromis_niloticusFamily: MMR_HSR1 Number of Genes: 284
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
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hbs1l
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-
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ehd3
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-
arl5c
nkiras2
rab5c
zgc:153654
ola1
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noa1
-
mfn1b
-
ehd4
arl13b
-
rab1ba
sept9a
-
rab11al
rab25b
rab25a
rab5aa
sept6
-
rab11ba
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-
lsg1
arl13a
RAB41
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rasl11b
ARL6
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ARL4D (1 of many)
drg1
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-
rab18a
srprb
ehd2b
arl8ba
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rabl3
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rab6a
rraga
si:rp71-84d19.3
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GIMAP8
zgc:113625 (1 of many)
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arfrp1
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srl
si:ch211-114c17.1
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rab34b
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rab30
rab15
arl8
si:dkey-37o8.1
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gtpbp10
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rab13
sept7b
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rab22a
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mtif2
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gtpbp6
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arf5
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SEPT4
sept8a
RAB39B
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OLA1
dnm1l
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sept4a
dnajc27
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si:dkey-16l2.16
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mtg1
rab23
rab6bb
arl1
arl14
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si:cabz01085950.1
gtpbp3
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eef2b
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nkiras1
rabl6b
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rab11bb
sept2
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sept15
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sept5b
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rab33ba
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rasl11a
RAB15 (1 of many)
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eral1
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sept8b
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gnl1
arl3l2
rab34a
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rasl10a
arl2
si:dkey-98f17.5
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rab14
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zgc:63587
hrasb
arl8a
kras
rabl2
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RAB29
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rasef
RAB11A
zgc:162879
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drg2
guf1
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arl3
rab33a
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rab35b
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SRL (1 of many)
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rab2a
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RAB17
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arl5a
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mtg2
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sar1b
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arl11
gtpbp4
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sept3
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arf2b
sept9b
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rab12
rheb
sar1ab
rab18b
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eif5b
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arf3b
rhebl1
gnl3
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si:ch211-11k18.4
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arl8bb
si:dkey-13a21.4
RAB7A
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arl4aa
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rab9b
zgc:113625 (1 of many)
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rab9a
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arl4ca
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arl4d
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Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.