Fundulus_heteroclitusFamily: MMR_HSR1 Number of Genes: 215
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
-
arl3l2
-
arfrp1
sept4a
-
OLA1
-
si:dkey-16l2.16
-
rab11al
ARL6
-
-
-
-
rab2a
drg1
-
-
-
rraga
-
-
-
si:dkey-13a21.4
ehd1a
-
rab25b
mtg2
-
rasd4
-
opa1
lsg1
sept5b
-
rheb
sept9b
arl1
rab12
mxb
sept8a
rab34b
rab35b
drg2
-
mtg1
-
sept3
arl2
RAB7A (1 of many)
-
-
-
srprb
gfm2
noa1
-
-
-
-
-
-
-
-
-
-
-
-
rab36
rab33ba
hbs1l
RAB7A (1 of many)
eefsec
si:rp71-84d19.3
mfn1b
-
-
arf3b
-
-
rhebl1
-
-
-
-
-
-
-
-
sept12
ola1
kras
rab15
rab9b
-
-
arl4aa
-
-
-
-
-
-
-
-
-
-
-
-
-
-
zgc:153654
arl4cb
-
hrasb
rab4a
-
-
-
-
-
-
-
arl3
-
-
srl
rabl3
-
-
mfn2
gnl1
zgc:101559
-
SRL (1 of many)
gtpbp6
eral1
si:dkey-34d22.5
rab5c
nkiras2
-
-
-
rab22a
-
si:dkey-98f17.5
gtpbp4
-
rab42a
arl5c
rab34a
-
-
-
rab30
-
-
rab5aa
RAB15 (1 of many)
rab25a
-
-
-
rab1ba
rabl2
-
-
-
-
-
-
-
RAB29
-
RAB41
arl13b
-
arl5a
-
-
-
-
-
-
-
ARL10
rasl10a
-
si:cabz01085950.1
guf1
arl13a
-
-
-
sept2
si:dkey-37o8.1
sept6
rab38b
-
-
-
-
-
rab11bb
gtpbp10
RAB14
-
sept5a
ehd3
zgc:63587
arl14
-
RAB9A (1 of many)
-
SEPT7
nkiras1
arf2b
rasl11b
-
-
si:dkey-32e23.4
-
rab18a
arl8bb
-
-
rab11a
rasl11a
si:ch211-11k18.4
sar1b
-
-
-
-
-
-
rab18b
arl8ba
-
-
ehd2b
-
RAB39B
gnl3
sept15
-
rab9a
rab13
SEPT4
cracr2ab
sar1ab
-
-
-
-
-
-
-
rab33a
zgc:171927
gtpbp3
rasef
-
rab6bb
zgc:162879
rab11ba
-
gnl2
rab1ab
-
-
rab23
arf5
-
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.