Pygocentrus_nattereriFamily: MMR_HSR1 Number of Genes: 251
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
arf1
-
-
-
zgc:63587
hrasb
rab25a
rabl3
mtg1
-
sept5b
rasl11b
sept9a
-
opa1
-
gtpbp6
-
-
-
-
-
arl5c
rab18b
irgf2
zgc:153642 (1 of many)
-
rab34a
-
-
-
-
-
-
rab3c
si:ch211-229i14.2
-
arfrp1
-
-
-
-
guk1b
arl13b
arf3a
-
-
gtpbp10
-
rab13
-
rheb
arf4a
-
-
-
-
-
-
-
gnl3l
-
gnl2
-
nkiras2
sept8a
arf2b
mtif2
-
-
-
rab25b
-
-
si:dkey-110g7.8
SEPT4
-
ARL4D
-
-
-
RAB9A (1 of many)
-
-
-
EHD1
-
mfn1b
rasl11a
sept5a
arl8ba
sar1ab
rab20
-
-
-
-
-
-
-
-
arf3b
rab5ab
arl4ab
-
eral1
srprb
-
drg1
arl3l2
rab6bb
nkiras1
eef2l2
sept2
rab30
rabl6b
rraga
-
-
-
-
rab2a
rab15
sept15
-
gtpbp3
rab18a
noa1
zgc:162879
-
-
ola1
mtg2
-
-
-
rab1ba
gnl3
-
-
arl3l1
-
rab39bb
rab1ab
rab39ba
zgc:153654
-
-
-
hrasa
zgc:153642 (1 of many)
-
-
-
-
-
-
-
-
-
-
sar1b
si:ch211-254c8.3
-
zgc:110197
rab11a
-
rab12
-
rab34b
sept4a
rab22a
-
zgc:162239
-
lsg1
-
-
-
RAB15 (1 of many)
arf2a
sept7b
rasef
sept9b
sept7a
rab42a
-
eefsec
ehd2a
arl8bb
rab38b
-
-
-
-
-
-
-
zgc:101559
RAB9A (1 of many)
-
-
-
arl5a
rab9b
gfm2
-
-
-
-
-
si:dkey-16l2.16
arl2
ehd4
-
RASL10B
-
-
gtpbp4
dnm1l
CRACR2A
rab11ba
zgc:100918
si:dkey-32e23.4
zgc:113625
-
-
-
-
-
-
gnl1
si:dkey-98f17.5
sept6
-
rab41
-
rab36
si:ch211-11k18.4
-
-
-
-
rab33a
sept3
ehd1a
srl
drg2
rab5aa
sept8b
eif5b
-
ARL6
rabl2
-
rab23
si:rp71-84d19.3
guf1
arl11
dnajc27
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
sept12
ehd2b (1 of many)
-
hbs1l
ehd2b (1 of many)
-
eef2b
arl3
mfn2
-
-
-
-
rab5c
-
rab6ba
arl4cb
si:cabz01085950.1
kras
-
-
-
-
arl1
-
ehd3
-
-
rab11al
cracr2ab
rab33ba
-
zgc:171927

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.