Mastacembelus_armatusFamily: MMR_HSR1 Number of Genes: 226
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
ehd4
rab32b
lsg1
rab33a
-
rab33ba
-
CRACR2A
si:cabz01085950.1
-
rab1ba
rasef
-
sept9b
arf3b
rhebl1
nkiras1
arl1
-
rab42a
si:ch211-11k18.4
arl3
-
ARL6
zgc:153654
rab15
sept12
-
gnl1
-
-
ola1
arl11
sept3
sept2
hrasb
mtg1
drg2
arl8
-
cracr2b
-
-
kras
OLA1
mfn1b
rab22a
rheb
rab11bb
-
-
-
-
-
-
-
eral1
-
-
sept5b
-
rab12
RAB15 (1 of many)
RAB29
gtpbp3
arl3l2
gnl2
arf2b
-
-
rabl2
-
mfn2
arl2
si:rp71-84d19.3
sept8b
zgc:162879
gnl3
SEPT4
eef2b
rab6ba
drg1
rab9b
-
rab36
rasl11a
rab11al
rab25b
-
sept7b
cracr2ab
rab2a
-
-
-
-
-
-
-
-
arl4aa
arl14
srprb
rab30
rraga
rab6bb
-
-
-
-
-
-
-
rab25a
-
rab6a
-
-
rab5aa
-
-
-
-
-
gtpbp6
-
-
-
-
rab14
-
-
-
-
RAP2B
-
gtpbp10
-
-
-
-
-
-
-
-
arl4cb
rab9a
sept15
arl8a
SRL (1 of many)
gtpbp4
-
noa1
rab18a
sept5a
zgc:63587
si:dkey-98f17.5
rab13
ehd3
rasl11b
guf1
-
irgf3
rabl3
-
-
rab20
-
-
-
rab23
-
-
-
-
-
guk1a
-
-
-
arl8ba
rab11a
zgc:101559
-
-
-
-
-
-
-
-
-
-
-
-
mtif2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
si:ch211-229i14.2
-
-
-
-
-
-
rab18b
-
-
rab11ba
rab34a
-
-
si:dkey-16l2.16
-
arfrp1
rabl6b
-
arl5a
sept6
-
-
zgc:171927
rab34b
-
-
-
arl13a
rab41
sept4a
si:dkey-13a21.4
arf5
sar1ab
RAB39B
arl13b
sept8a
sar1b
ehd1a
-
-
-
-
arl5c
nkiras2
rab5c
-
eif5b
dnajc27
dnm1l
srl
gnl3l
-
-
arl8bb
sept9a
RAB7A
eefsec
mtg2

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.