Poecilia_mexicanaFamily: MMR_HSR1 Number of Genes: 249
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
rasl11b
EEF2
RAB15 (1 of many)
sar1ab
-
arl5c
-
-
rab11al
gtpbp6
-
-
-
-
SEPT7 (1 of many)
eefsec
rab25b
-
-
-
OLA1
rab1ba
rab34a
-
-
-
-
-
-
-
-
-
rabl3
-
-
-
-
-
drg2
-
-
-
-
-
-
-
rab1ab
rab33a
-
-
rab6a
ehd1a
zgc:153654
-
-
-
rab22a
sept2
-
-
arl8bb
sept5a
-
-
zgc:63587
RAB7A
-
-
rabl2
-
-
-
RAB39B
gnl1
-
mtg1
-
-
-
-
-
-
rab25a
-
gfm2
SRL (1 of many)
-
-
arl1
-
-
-
ehd3
rasef
dnm1l
eif5b
srl
-
-
-
arl4cb
-
-
si:dkey-16l2.16
rab5aa
cracr2ab
-
-
-
-
arl3l2
rab11ba
-
rab11a
-
-
ehd2b
rraga
rab18b
-
ARL6
-
-
-
arl3
-
-
-
-
-
-
-
-
-
arl8ba
-
-
-
si:dkey-32e23.4
sept9a
arf5
rab30
-
-
arl2
-
sept8b
zgc:101559
RAB9A (1 of many)
-
sept7b
rab12
-
-
rab14
-
-
-
-
-
gtpbp10
si:cabz01085950.1
-
-
rab5c
nkiras2
arl11
-
-
-
-
-
-
-
-
srprb
-
rab4a
sept15
rab11bb
-
-
-
mfn1b
si:dkey-34d22.5
rab18a
rab34b
-
-
-
-
arfrp1
rab9b (1 of many)
-
sept4a
-
rab41
guf1 (1 of many)
rheb
-
-
-
SEPT4
-
-
-
-
zgc:162879
-
gtpbp3
si:dkey-37o8.1
rab36
-
noa1
arl13b
-
ola1
drg1
-
-
-
gtpbp4
sar1b
-
-
-
-
-
-
arl8a
lsg1
rab23
ehd4
sept5b
-
arl13a
rasl11a
eral1
-
dnajc27
-
-
-
-
si:dkey-98f17.5
gnl3
-
-
gnl2
si:dkey-13a21.4
rab6ba
sept3
rab42a
KRAS
-
-
-
-
-
-
-
-
-
-
-
-
-
arf3b
rabl6b
rhebl1
cracr2b
hrasb
nkiras1
rasd4
-
-
RAB29
rab6bb
-
rab35b
-
-
arl4d
si:rp71-84d19.3
rab15
arl5a
arl8
mtif2
zgc:171927
-
-
sept12
rab33ba
-
arf2b
-
mtg2
-
-
-
sept6
guf1 (1 of many)
rab9a
-
-
gnl3l
-
rasl10a
-
si:ch211-11k18.4
sept8a
rab9b (1 of many)
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.