Astyanax_mexicanusFamily: DEAD Number of Genes: 77
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
ighmbp2
ddx27
ascc3
ddx51
dhx40
cmss1
ddx1
dhx57
dhx15
DDX41
dhx38
ddx43
ddx5
recql4
ercc6l
-
polq
dhx16
snrnp200
ddx28
hfm1
dhx37
ddx10
ddx46
YTHDC2
ddx21
ddx54
recql5
dhx8
ddx31
-
ifih1
wrn
ddx4
ddx47
dicer1
smarca1
ddx42
skiv2l
helq
chd1l
rad54l
ddx3xb
tdrd12
-
recql
ddx24
dhx30
-
zgc:193690
DDX5
-
ddx49
blm
dhx36
ddx23
ddx39b
DDX39A
mtrex
dhx29
eif4a2
ddx56
ddx6
ddx55
-
zgc:158828
eif4a3
ddx18
ddx52
eif4a1a
dhx58
ddx3xa
ddx61
-
ddx59
eif4a1b
-
ddx20
-
-
-
-
ddx19

Introduction

Pfam

Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

InterPro

Proteins with this domain include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

Reference

  1. de la Cruz J, Kressler D, Linder P; , Trends Biochem Sci 1999;24:192-198.: Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. PUBMED:10322435 EPMC:10322435 .

  2. Aubourg S, Kreis M, Lecharny A; , Nucleic Acids Res 1999;27:628-636.: The DEAD box RNA helicase family in Arabidopsis thaliana. PUBMED:9862990 EPMC:9862990.