Poecilia_formosaFamily: MMR_HSR1 Number of Genes: 260
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
gtpbp4
-
-
-
-
-
-
-
-
-
-
-
rab33ba
-
-
-
-
-
SRL (1 of many)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rhebl1
noa1
rab12
arl2
-
-
arf3b
rab1ab
-
-
hrasb
dnm1l
rasl11a
-
arl1
rabl6b
-
-
RAB7A
rab6ba
eefsec
arfrp1
-
-
-
arl8bb
-
rab33a
-
-
-
-
RAB39B
sept15
-
-
-
zgc:113625
-
-
si:dkey-16l2.16
rab2a
rab42a
rheb
sept7b
cracr2ab
arl13b
rab30
sar1b
si:dkey-185m8.2
-
nkiras1
arl3l2
-
-
-
-
rab11ba
-
arl11
-
dnajc27
zgc:162879
guf1
-
-
rab35b
mtg1
-
drg2
sept8a
SEPT7 (1 of many)
eif5b
-
rab18a
DRG2 (1 of many)
arl5c
gnl3l
-
si:ch211-11k18.4
rasl10a
si:ch211-113e8.5
-
ARL6
rab34a
rabl3
si:cabz01085950.1
-
-
rab11a
CRACR2A (1 of many)
-
-
-
-
mtg2
sept4a
-
-
ehd1a
rab25a
-
-
-
sept8b
-
ehd3
cracr2b
-
rab5aa
gtpbp3
rab25b
rab11al
srprb
srl
RAB41
rab34b
rab23
-
nkiras2
-
zgc:63587
ehd2b
sept5a
rab5c (1 of many)
-
-
arl3 (1 of many)
sept9a
arl8a
arl3 (1 of many)
rab1ba
-
-
-
eef2b
gnl2
-
rab22a (1 of many)
rab22a (1 of many)
RAB29
-
-
-
-
si:dkey-37o8.1
RAB15 (1 of many)
arf2b
-
OLA1
-
-
rab18b
zgc:171927
zgc:153654
-
-
si:dkey-34d22.5
sept3
-
rab4a
-
si:dkey-98f17.5
SEPT4
-
-
gnl1
si:dkey-13a21.4
-
-
kras
-
gtpbp6
arf5
sept12
-
-
-
-
-
gtpbp10
ola1
arl8ba
arl8
arl13a
-
-
si:rp71-84d19.3
sept5b
sept2
mfn2
neb
-
gnl3
rab15
rabl2
-
-
-
mtif2
ehd4
eral1
-
-
-
-
rasef
-
rraga
rab6a
drg1
RAB14
-
-
-
-
rasd4 (1 of many)
-
rab9b
arl14
-
-
-
-
-
-
-
arl4aa
-
arl4cb
arl4d
rasd4 (1 of many)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
lsg1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
sar1ab
rab5c (1 of many)
-
-
-
-
-
-
-
-
mfn1b
sept6 (1 of many)
-
-
-
rab9a
sept6 (1 of many)
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.