Oryzias_melastigmaFamily: MMR_HSR1 Number of Genes: 202
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
rab9a
-
-
RAB29
sept3
-
ehd3
sar1b
ehd2b
arfrp1
rab30
rab23
drg1
si:dkey-37o8.1
rasl10a
arl8ba
-
-
mtg1
arf2b
-
rab11ba
-
si:dkey-98f17.5
rab14
-
-
arl8
rab34a
-
-
-
-
-
arl4aa
-
-
-
-
-
-
-
-
-
-
-
arl4d
-
-
OLA1
gtpbp6
-
sar1ab
sept8a
gtpbp3
arl3l2
rraga
gnl3
SRL (1 of many)
gtpbp10
rab1ab
RAB39B
-
sept8b
cracr2ab
arl4cb
mtg2
arl11
-
-
-
-
-
rab18b
-
eral1
arl3
-
-
rab12
rab13
rab9b
-
-
arl2
rabl2
sept2
sept4a
-
si:dkey-32e23.4
-
-
-
-
-
-
rhebl1
arf3b
RAB9A (1 of many)
-
srl
-
arl13b
-
noa1
rab34b
rab25a
rasd4
-
-
dnm1l
rab5aa
-
-
RAP2B
-
kras
-
-
srprb
-
-
ola1
zgc:101559
-
-
-
rheb
gfm2
-
-
-
-
rab6ba
sept9a
-
-
mfn1b
gnl1
sept6
sept15
rabl3
si:dkey-16l2.16
arl13a
SEPT4
-
eif5b
-
guf1
zgc:55558
rab2a
-
arl14
-
-
ARL6
arl5a
RAB41
-
rab33a
rab11a
-
sept5a
-
dnajc27
zgc:63587
si:rp71-84d19.3
si:dkey-34d22.5
sept9b
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
si:ch211-11k18.4
hrasb
-
-
-
-
-
ehd1a
RAB15
-
gnl2
gtpbp4
ehd4
rab33ba
rasl11a
eef2b
rab11al
rab25b
rab42a
-
-
-
-
zgc:171927
rab18a
ARF5
-
-
SEPT7 (1 of many)
drg2
arl5c
-
rab15
sept7b
lsg1
-
-
sept5b
-
rabl6b
nkiras2
rab5c
-
rasef
arl1
mfn2
rab6bb
gnl3l
opn1sw2 (1 of many)
ARL10
-
arl8bb

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.