Takifugu_rubripesFamily: MMR_HSR1 Number of Genes: 165
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
sept3
eral1
-
-
-
-
-
-
si:rp71-84d19.3
drg2
mtg2
-
-
-
-
-
-
-
arl4cb
-
rab2a
arl13b
-
-
-
-
-
gtpbp3
gtpbp4
arl3l2
rab18b
rab1ba
gpn1
rab6bb
rheb
rab18a
-
arl2
gnl3
-
-
rab34a
-
srl
sept8b
arl1
rab33ba
sar1ab
arf3
sept8a
-
rab25b
rab11al
eif5b
-
RABL3
-
guf1
arl4aa
rasl11a
rab9a
sept7b
nkiras1
si:dkey-37o8.1
rab41
arfrp1
gnl2
zgc:101559
drg1
RAB7A
ehd2b
rab42a
eefsec
-
-
sept6
sept4a
-
gtpbp6
arf3
gnl1
-
arl8bb
rasef
sept9a
arl11
rabl2
mtif2
sept9b
rasl10a
-
-
gnl3l
SRL (1 of many)
-
ran
rraga
mtg1
-
arl8a
RAB9A (1 of many)
ehd3
-
guk1a
rab34b
-
arl5a
RAB15 (1 of many)
ola1
rab5c
rab23
SEPT4
-
hbs1l
sept5a
zgc:63587
dnm1l
ARL6
-
-
lsg1
mfn1b
OLA1
-
-
noa1
-
rab15
-
-
-
arl3
rab22a
sept5b
-
-
rhebl1
-
si:ch211-11k18.4
rab33a
-
-
arl8
-
-
-
-
-
rab35b
rab11a
-
-
si:dkey-98f17.5
sept12
gtpbp10
-
-
sept2
rasl11b
rab11bb
ehd4
srprb
rasd4
rab30
arl5c
rab20
rerg
-
rab1ab
arl8ba
rab6a
CRACR2A
dnajc27
kras
-
-
sar1b
-
-
rab13
rab5aa
-
rab12
-
-
-
-
hrasb
RAB1A
rab39bb
si:dkey-16l2.16
-
-
-
-
-
-
ehd1a

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.