Neolamprologus_brichardiFamily: MMR_HSR1 Number of Genes: 272
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
-
-
-
-
rab11bb
rabl2
arl5a
sept9b
-
-
-
-
-
-
drg1
rab15
rab2a
-
-
-
rab30
-
-
-
-
-
-
-
si:ch211-11k18.4
-
sept4a
-
RAP2B
-
eefsec
SRL (1 of many)
zgc:101559
-
-
RAB15 (1 of many)
-
ehd2a
ehd1a
-
-
-
-
-
-
-
-
-
-
sept2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
zgc:113625 (1 of many)
-
zgc:113625 (1 of many)
-
rab1ba
rasl11b
-
-
arl13b
rab13
-
kras
srprb
sept5b
RAB39B
-
-
rab11al
-
-
sept9a
-
-
-
-
-
-
-
-
-
-
-
-
cracr2ab
-
-
-
-
-
-
drg2
si:dkey-98f17.5
gtpbp10
-
-
-
-
zgc:171927
sept8a
-
arl2
-
-
nkiras1
-
-
-
-
rab33ba
-
rab32b
-
-
-
-
-
-
-
-
-
-
-
-
-
arl3
-
sar1b
-
-
-
-
-
-
-
-
rab18b
SEPT4
-
RAB29
-
si:dkey-16l2.16
-
gfm2
-
-
zgc:113625 (1 of many)
-
-
zgc:113625 (1 of many)
-
zgc:113625 (1 of many)
-
zgc:113625 (1 of many)
-
-
-
zgc:113625 (1 of many)
-
-
-
-
-
-
-
-
-
si:ch211-113e8.6
-
gnl2
arl3l2
arl8a
si:dkey-85k7.12 (1 of many)
-
mtg1
-
-
-
-
-
-
rab25a
sept6
OLA1
rasl11a
rab5aa
-
-
-
-
rasef
-
rabl3
-
rabl6b
-
sept8b
rab11a
gnl3
-
rab18a
si:dkey-37o8.1
rab6ba
rab23
rheb
rab9b
-
-
-
-
-
-
rab12
-
-
-
-
-
-
-
-
arl8
eral1
CRACR2A
rab6bb
rraga
-
-
-
rab6a
-
-
-
-
-
-
-
-
-
-
rhebl1
arf3b
-
mfn1b
ARL6
gtpbp6
-
-
RAB17
-
-
-
-
-
rab5c
-
-
-
-
sept3
-
-
-
sept5a
arl8ba
sar1ab
arf5
-
nkiras2
-
-
-
-
-
-
rab34a
arl1
gtpbp4
hbs1l
zgc:162879
eef2b
arl5c
-
-
-
-
opa1
-
-
-
-
-
-
-
-
-
-
-
-
-
arl4cb
-
-
-
-
-
gnl1
dnm1l
zgc:153654
-
-
rab42a
mfn2
-
gtpbp3
guf1
-
arl13a
RAB7A
-
-
eif5b
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rab33a
mtg2
si:ch211-113e8.5
-
dnajc27
ehd4
ehd3
rab41
ola1
-
-
-
-
-
-
-
-
-
si:dkey-13a21.4
-
-
-
-
-
-
gnl3l
arl8bb
srl
arf2b
-
rab11ba
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
RAB9A
-
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.