Scleropages_formosusFamily: MMR_HSR1 Number of Genes: 198
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
rab9a (1 of many)
-
eif5b
-
noa1
sept8a (1 of many)
si:ch211-11k18.4
-
arl11
rab1ab
-
-
arl1
rasl10a
rab6a
arl5b
SEPT4
-
-
-
-
-
-
hrasb
gtpbp4
rab9a (1 of many)
-
rasl10b
-
cracr2ab
arl6 (1 of many)
gtpbp6
rab33a
-
-
guf1
rab34a
-
rasd4
dnm1l
arf3a
-
rab41
zgc:100918
-
-
rab34
zgc:171927
-
sept6
arl13b (1 of many)
-
arl5a (1 of many)
-
-
-
-
rab35
zgc:101559
-
-
sept4a
-
-
-
-
sept9a
ehd2a
-
arl4cb
-
-
-
-
zgc:113625
-
-
-
-
-
-
-
-
-
-
arl2
-
rab11al
-
rab25a
rasd3
gnl3l
lsg1
-
rasef
rab11bb
rab39bb
OPA1
arf1
si:dkey-13a21.4
srl
-
arl13a
nkiras2
-
rabl3
eef2b
mfn2
rab9b
SEPT6 (1 of many)
sept3
ascl1b
-
gtpbp10
-
-
RAB41
-
rraga
-
MX1
rab22a
rab42
-
-
-
-
-
-
-
-
-
rab23
rab14
-
-
gnl1
gtpbp8
sar1a
sept5
zgc:63587
ehd3
rab5a
sept7a
rhebl1
-
rab2a
arf3
rab4a
-
ARL4A
-
eral1
MFN1 (1 of many)
si:ch1073-185p12.2
-
rab36
-
drg1
IRGC
-
mtg1
rab15
RABL6
rab18a
dnajc27
mtif2
mfn1b
si:dkey-98f17.5
-
-
-
rab39b
eef2l2
ola1
ARL4C
-
sept2
sept8
si:dkey-37o8.1
RAB6B
rasl11a
srprb
arl8ba
EHD1
gtpbp3
rab7a
sar1b
DNAJC27 (1 of many)
rab33b
arl8bb
gnl2
arfrp1
arl4aa
mtg2
ARF5
rab42a
rabl2
-
-
rab1ba
SEPT7 (1 of many)
eefsec
-
RAB7A (1 of many)
arl5a
gnl3
SRL (1 of many)
-
-
arl8a
rab13
-
-
-
-
-
-
-
ehd2
arl13b (1 of many)
-
arl6 (1 of many)
-
arl5c
drg2
sept12
sept15
zgc:162879
rheb
KRAS
-
rab33ba (1 of many)
rab11a

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.