Oryzias_latipes_hniFamily: MMR_HSR1 Number of Genes: 172
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
-
rab9a
-
rab41
-
SEPT4
-
eefsec
-
si:dkey-16l2.16
-
rab1ab
-
ehd4
-
rraga
-
rabl2
-
-
-
mtg1
-
rab6a
-
mfn2
-
arl8bb
-
ehd3
-
-
-
rheb
-
arl3
-
sept2
-
-
-
srprb
-
-
-
-
-
sept6
-
gnl1
-
arl8a
-
arfrp1
-
RAB15 (1 of many)
-
rab12
-
rhebl1
-
RAB29
-
rerg
-
eif5b
-
zgc:63587
-
arf3b
-
sept5a
-
sar1ab
-
-
-
arl1
-
rab7a
-
-
-
-
-
-
-
dnajc27
-
si:dkey-32e23.4
-
-
-
sept15
-
arl4cb
-
arl15a
-
-
-
-
-
si:dkey-37o8.1
-
arl11
-
hras
-
-
-
-
-
rab18a
-
rab5c
-
-
-
-
-
nkiras2
-
rabl3
-
rab9b
-
sept3
-
-
-
noa1
-
-
-
-
-
arl8
-
rab34a
-
arl5c
-
-
-
drg2
-
sept8b
-
CRACR2A
-
rab6ba
-
sept9b
-
gtpbp10
-
-
-
arl4aa
-
rab18b
-
-
-
arl2
-
-
-
-
-
si:ch211-11k18.4
-
sept7b
-
zgc:101559
-
arl3l2
-
-
-
rab6bb
-
si:dkey-98f17.5
-
gtpbp3
-
zgc:55558
-
rab25b
-
rab11al
-
arl13b
-
-
-
rab42a
-
arl14
-
-
-
gnl3
-
-
-
-
-
-
-
SEPT7
-
drg1
-
ola1
-
rab30
-
ARL6
-
si:ch73-285p12.4
-
gpn1
-
-
-
rasl10a
-
-
-
rab34b
-
lsg1
-
-
-
dnm1l
-
sept9a
-
sept4a
-
sept5b
-
ehd2b
-
ARL5A
-
-
-
-
-
-
-
-
-
-
-
rabl6b
-
eef2b
-
SRL (1 of many)
-
rab33ba
-
rab15
-
mtg2
-
eral1
-
ehd1a
-
gtpbp6
-
gnl2
-
rasl11a
-
rab14
-
-
-
RAB39B
-
gnl3l
-
rab11bb
-
rasd4
-
si:dkey-13a21.4
-
guf1
-
srl
-
rab2a
-
rasef
-
rab23
-
rab33a
-
si:dkey-34d22.5
-
sept8a
-
rab25a
-
rab11ba
-
RAB11B
-
gtpbp4
-
rab5aa
-
kras
-
zgc:171927
-
OLA1
-
mfn1b
-
arl8ba
-
rab3db
-
-
-
arl13a
-
si:ch211-113e8.5
-
sar1b
-
mtif2
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.