Lepisosteus_oculatusFamily: MMR_HSR1 Number of Genes: 165
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
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-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
hrasb
ehd1b
-
dnm1l
mfn1b
rabl6b
-
EIF5B
rab35b
arfrp1
-
zgc:63587
rasef
arl2
arl5a
srl
rab12
rab36
-
-
-
-
gtpbp3
-
-
-
eral1
rab42a
si:dkey-34d22.5
mtg2
sept15
si:dkey-98f17.5
irgf3
-
mtg1
-
sept4a
-
lsg1
rab2a
-
gfm2
mfn2
rab14
rab34a
rab30
zgc:101559
-
drg2
eef2b
rabl3
sept2
MX1 (1 of many)
rab5ab
eef2l2
sept12
-
nkiras1
sept7b
rab22a
ola1
rab18a
rhebl1
arf3a
gtpbp6
-
-
si:rp71-84d19.3
rab11al
rab25a
-
guk1b
ARF1
srprb
ehd4
rheb
sar1b
gtpbp10
arl6
nras
arl13b
rab33ba
gnl3
sept8a
arl8
arl8bb
arl3l2
-
-
noa1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
sept3
-
gtpbp4
-
guf1
rab15
arl8a
rab5c
nkiras2
arl3
ARF4
sept9a
-
-
-
-
rab11a
rasl11b
zgc:162879
rasl11a
eefsec
RAB7A
-
-
zgc:171927
gnl3l
si:dkey-13a21.4
rab39bb
-
rraga
rab41
sept6
-
arl13a
kras
rab33a
mtif2
zgc:100918
-
gpn1
rab1ab
hbs1l
si:cabz01085950.1
-
dnajc27
rabl2
-
ehd3
cracr2ab
rab23
si:dkey-125e8.4
-
rab9a
rab9b (1 of many)
arl4d
-
-
-
-
-
rasd4
arl11
arl4cb
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-
-
-
-
-
-
-
-
-
rasd3
-
-
arl4aa
rab9b (1 of many)

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.