Oryzias_latipesFamily: MMR_HSR1 Number of Genes: 171
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
zgc:171927
-
sar1b
-
sept6
sept5b
si:dkey-16l2.16
dnajc27
sept8a
-
eefsec
arl13a
eif5b
rhebl1
RAB39B
arl15a
-
-
-
-
ehd2b
-
zgc:63587
sept4a
arl5c
rab34b
sept9b
dnm1l
rheb
-
nkiras2
rab5c
rab12
sept3
rab34a
-
rab18a
sept2
arl3l2
ARL6
rasef
arl2
sept8b
mfn1b
gtpbp4
arl13b
rab9b
-
srprb
-
-
sar1ab
-
-
-
-
rab14
-
lsg1
SEPT4
si:dkey-98f17.5
srl
-
-
SEPT7
gtpbp3
arl1
-
-
mtg1
rraga
gtpbp10
guf1
drg1
rab18b
arl5a
sept9a
rabl2
rab23
ehd4
arfrp1
-
rab15
arl8
arl3
si:ch211-113e8.5
si:dkey-32e23.4
-
eral1
-
mtg2
-
si:ch211-11k18.4
rab25a
rab5aa
arl8bb
gnl1
drg2
-
rab2a
ola1
arl4cb
rab11bb
si:dkey-34d22.5
-
gnl3l
gnl2
cracr2ab
eef2b
SRL (1 of many)
-
-
rab11ba
-
gnl3
gtpbp6
rab11al
rab25b
rab6bb
sept7b
rab3db
-
ehd3
OLA1
-
rab9a
-
RAB11A
arl11
hrasb
-
-
si:dkey-37o8.1
-
-
rabl3
noa1
-
rab42a
ehd1a
-
kras
sept5a
RAB15
zgc:55558
-
-
arf3b
si:dkey-13a21.4
mfn2
-
-
CRACR2A
si:ch211-229i14.2
mtif2
-
-
rab6a
-
sept15
-
-
rasl11a
-
arl14
RAB41
RAB29
arl8ba
-
-
-
-
rab1ab
rasl10a
rab35b
arl8a
-
arf2b
arl4aa
-
rab30
-
rab33ba
-
-
rab33a
zgc:101559

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.