Cynoglossus_semilaevisFamily: MMR_HSR1 Number of Genes: 168
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
RAB15 (1 of many)
-
arl8
rasl11a
arl4cb
-
-
si:ch211-113e8.6
-
-
-
mtif2
-
gtpbp10
sept6
sept15
zgc:113625
-
rab13
arl13a
-
RAB7A
sept9b
eefsec
arf3b
rab6ba
arl5a
rhebl1
rasd4
-
CRACR2A
rab15
sept7b
mfn2
-
-
sar1ab
rab41
gnl3
arl13b
-
-
-
ola1
rabl2
OLA1
-
noa1
MX1
kras
ARL6
arf5
ehd1a
zgc:101559
sept3
-
-
-
rab11ba
ehd2b
mtg1
-
-
gtpbp6
rab30
gtpbp4
rab11a
ARL4A
cracr2b
hrasb
cracr2ab
lsg1
arl11
-
SEPT4
-
arf2b
arl5c
-
-
si:dkey-16l2.16
-
rab9a
-
-
-
-
nkiras1
-
rab23
rab42a
arl3l2
rab20
-
ehd4
gnl3l
DNM1L
sept12
-
rab18a
SRL (1 of many)
-
rab25b
rab11al
rab11bb
guk1a
-
-
-
sept9a
rab34a
gfm2
-
-
arl3
rab35b
rasl10a (1 of many)
mfn1b
arfrp1
zgc:162879
-
eef2b
guf1
rraga
eif5b
-
opa1
-
dnajc27
zgc:171927
rab9b
-
-
dnm1l
-
arl4aa
-
rabl3
sar1b
sept8b
si:rp71-84d19.3
rasl10a (1 of many)
-
-
-
si:cabz01085950.1
rabl6b
eral1
srl
rab33a
nkiras2
rab14
rab6bb
gtpbp3
rheb
rab18b
arl2
rab12
-
rab5c
rab25a
sept8a
srprb
rab2a
drg1
si:dkey-98f17.5
sept2
si:ch211-11k18.4
-
rasef
-
-
-
rab34b
drg2
-
limk1b
arl8a
rab1ba
-
si:dkey-34d22.5
ehd3
zgc:63587
sept5a
gnl1
RAB39B
rab22a
si:dkey-37o8.1
-
rasl11b
gnl2
rab33ba
mtg2
-
-
arl8ba

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.