Poecilia_reticulataFamily: MMR_HSR1 Number of Genes: 240
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
SRL (1 of many)
-
-
-
-
-
-
-
-
si:dkey-98f17.5
-
rab33ba
-
-
-
-
-
sept7b
srprb
-
-
-
-
-
sept9a
rab9a
-
-
arl14
-
-
cracr2ab
arl5a
-
gnl3
rab33a
-
-
ehd4
arl3l2
rab1ba
-
-
nkiras2
-
-
arl3
-
guf1
arl8ba
-
-
-
-
-
-
arl8a
-
-
-
-
-
-
OLA1
sept8a
sar1b
si:dkey-16l2.16
mtif2
-
-
-
-
ola1
-
-
-
-
rab18a
gnl2
-
-
lsg1
rasl11a
rab25a
-
-
-
-
si:dkey-37o8.1
arl13b
-
-
-
rab11ba
-
-
-
-
-
-
-
-
-
-
-
-
eral1
rab9b
-
zgc:101559
-
-
RAB39B
-
-
-
-
-
-
-
-
-
sept2
-
srl
mtg2
-
-
-
-
-
-
-
-
-
arl8
-
mfn2
dnm1l
arf2b
arl5c
-
-
-
-
-
-
sept4a
rab34a
-
-
-
-
-
-
-
RAB41
-
-
-
rab11a
-
-
rab34b
-
rab5c
rab4a
dnajc27
-
rab15
drg1
-
zgc:113625
-
-
zgc:153654
rheb
arl11
rab22a
arl13a
noa1
sept5a
zgc:63587
arl4d
-
-
-
-
-
-
-
RAB7A (1 of many)
eefsec
sept6
-
-
gtpbp3
arf3b
sept3
-
rhebl1
gnl1
ehd3
-
-
arl1
-
-
-
-
-
-
-
-
-
-
-
nkiras1
-
sept5b
rab42a
rabl6b
rab11bb
rab30
-
rabl2
rabl3
rab2a
mfn1b
-
-
si:ch211-11k18.4
si:dkey-85k7.12 (1 of many)
-
-
-
rab6ba
arl4cb
-
-
ehd1a
-
sar1ab
sept9b
ehd2b
-
-
-
-
gtpbp10
-
-
-
-
rap2b
-
-
-
-
-
-
-
-
-
-
-
rasd4
-
-
-
-
-
-
-
-
-
-
-
rab11al
rab25b
-
rab12
zgc:171927
rab13
ehd2a
eef2b
gtpbp6
RAB7A (1 of many)
KRAS
-
-
rasef
si:rp71-84d19.3
hrasb
rasl11b
-
arfrp1
RAB15 (1 of many)
gtpbp4
drg2
-
-
RAB29
rab1ab
-
arl2
-
CRACR2A (1 of many)
rraga
-
-
arl8bb
rab6a
mtg1
-
rasl10a
-
ARL6
gnl3l
SEPT4
-
-
si:dkey-13a21.4
rab23
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.