Labrus_bergyltaFamily: MMR_HSR1 Number of Genes: 273
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
sept4a
-
-
-
-
-
-
-
-
-
arl1
sar1ab
rab30
eef2b
rab42a
RAB39B
rab35b
RAB7A
hrasb
guk1a (1 of many)
arf1
rab25a
mtg2 (1 of many)
rab5aa
hbs1l
si:dkey-34d22.5
rab4a
rab22a
-
-
rabl2
-
-
rab6a
sept12
rab5c
-
-
-
nkiras2
ehd1a
-
-
rraga
arfrp1
si:dkey-32e23.4
-
rab32b
GUK1 (1 of many)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
gnl3l (1 of many)
rab18a
-
-
-
-
rab11ba
gtpbp10
-
arl5c
-
-
-
zgc:162879
sept15
sept7b
sept2
-
-
si:dkey-16l2.16
mtg2 (1 of many)
dnm1l
-
gnl2
sept9b
RAB41
arf2b
ehd3
-
-
-
-
-
-
-
-
-
-
-
-
CRACR2A
-
-
ARL6
-
-
gnl1
arl4d
-
-
-
-
-
-
-
gnl3
rab9b
-
-
-
-
-
mfn2
-
-
-
-
-
-
-
arl4cb
si:dkey-98f17.5
-
-
-
-
drg2
-
-
-
rab23
rab15
mtif2
arl4aa
rab12
SRL (1 of many)
-
-
-
mtg1
-
-
-
cracr2b
rab33a
-
-
-
-
-
-
arl13b
rheb
-
-
-
-
-
rab11bb
-
-
-
-
-
-
-
-
arl11
-
-
-
-
OLA1
rasl11a
rab11al
rab25b
eral1
arl5a
arl2
-
-
-
-
-
-
-
-
-
-
arl8
-
-
-
sept8a
-
-
-
eefsec
-
-
-
-
-
-
-
-
-
-
-
si:dkey-13a21.4
gnl3l (1 of many)
ehd2b
cracr2ab
-
-
RAB29
ola1
arf3b
arl8bb
-
rhebl1
rab6bb
rab18b
rab14
-
-
-
-
-
-
-
-
sept3
-
-
-
-
-
-
-
-
ehd4
-
-
-
-
-
-
-
-
rab9a
rabl3
rab2a
rasl11b
rab1ba
-
-
arl14
-
si:dkey-37o8.1
gtpbp4
srprb
-
-
arl8ba
-
-
-
-
-
-
-
-
-
-
-
-
-
drg1
-
noa1
-
-
-
-
-
gtpbp6
lsg1
sept9a
ARF6
-
sept5a
zgc:63587
mxa
-
-
-
-
-
-
-
zgc:101559
arl3
rab34a
-
-
-
-
arf5
srl
SEPT4
rab33ba
rab13
-
rab11a
sept8b
rab6ba
si:rp71-84d19.3
RAB15 (1 of many)
-
eif5b
-
gtpbp3
-
-
-
-
nkiras1
-
sar1b
si:ch211-197g15.10
-
si:cabz01085950.1
RAB17
-
SEPT7 (1 of many)
rab1ab
arl3l2
rab34b
-
-
guf1
-
-
-
-
-
-
dnajc27
RAB1A
-
-
kras
-
-
sept6
arl13a
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.