Cyprinodon_variegatusFamily: MMR_HSR1 Number of Genes: 255
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
RAB7A
-
-
-
-
-
-
-
arf2b
drg1
-
si:dkey-13a21.4
gnl3l
arf3b
rhebl1
hbs1l
arl13b
-
-
-
-
rab41
arl1
-
-
gtpbp10
-
ehd2b
opa1
lsg1
-
-
RAB9A (1 of many)
sept9a
-
-
-
-
-
-
-
-
-
srl
-
-
si:dkey-16l2.16
rab12
-
-
mtg1
ola1
rheb
srprb
arl4aa
-
-
rasd4
-
-
-
rab6bb
-
-
-
-
sept6
-
-
noa1
sept8a
ARL8B
-
eefsec
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
arl13a
-
-
-
KRAS
si:cabz01085950.1
rasef
-
-
-
-
arl8
-
ehd4
mtif2
-
-
-
-
-
-
-
-
-
-
-
-
mfn1b
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rab5aa
RAB15 (1 of many)
sept2
-
arl2
si:rp71-84d19.3
-
-
hrasb
gtpbp4
ARF5
zgc:171927
-
-
-
-
-
-
-
nkiras2
rab5c
-
-
-
-
si:dkey-37o8.1
-
-
-
rabl3
-
-
-
-
cracr2ab
gfm2
-
-
-
si:dkey-32e23.4
-
arl3l2
gnl3
rab4a
-
-
-
-
-
-
-
-
-
-
si:dkey-98f17.5
mfn2
-
rabl2
-
rab33a
ehd1a
-
-
nkiras1
mtg2
arl5c
rab35b
rab6ba
-
rasl11a
-
-
-
zgc:153654
-
rasl10a
eral1
-
-
-
CRACR2A (1 of many)
rab11a
-
-
RAB29
sept7b
-
-
zgc:162879
-
-
-
-
-
-
-
-
-
RAB39B
sar1ab
ARL6 (1 of many)
-
-
si:ch211-11k18.4
gtpbp6
rab18a
-
-
-
-
-
-
ehd3
ARL6 (1 of many)
rab9a
-
-
-
-
-
-
si:dkey-34d22.5
-
-
-
sept15
rab2a
gnl2
zgc:63587
sept5a
rab30
-
-
rab34a
-
-
-
rab22a
-
sept8b
OLA1
eef2b
-
-
-
-
-
-
-
-
-
-
-
-
-
zgc:101559
arl11
eif5b
-
-
-
-
rab25b
rab11al
-
arl8ba
rab23
-
-
ARL5A
arl4cb
-
dnm1l (1 of many)
-
-
guf1
-
-
-
SEPT4
rraga
rab9b
arl3
gtpbp3
rab6a
rab14
SRL (1 of many)
-
-
gnl1
-
-
-
-
-
drg2
sar1b
-
-
-
-
-
-
-
-
-
-
-
sept3
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.