Ictalurus_punctatusFamily: MMR_HSR1 Number of Genes: 208
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
-
-
-
-
-
-
Arf2
Ehd2
RAB20
si:ch1073-322p19.1
-
-
-
-
zgc
sept9
-
-
-
-
-
-
-
arl8ba
-
-
arl4cb
ehd1a
gtpbp10
rab13
-
arl2
-
-
-
-
Arf5
-
srprb
arf5
kras
Ehd3
si:dkeyp-69e1.8
sept8a (1 of many)
-
-
gnl1
-
RERG
-
dnm1l
hras
RAB11A
Rab25
arl5b
-
arf1
-
-
-
-
-
-
arf4
si:dkey-32e23.4
si:ch1073-185p12.2
-
-
-
gtpbp3
rab7a
rab14
SEPT4
rab2a
-
-
arf3a
eef2l2
zgc:162239
-
SEPT4a
arl3
lsg1
rab1a
rasef
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rasl11b
-
-
sar1b
hbs1l
rab22a
rab18b
SEPT8b
rab42a
Rab35
SRL (1 of many)
-
nkiras1
arf1
sept8a (1 of many)
RAB25
-
srl
-
rabl3
-
eral1
-
-
-
-
cracr2b
mtif2
arl1
rab9a
sept15
-
rab33a
zgc:153654
GTPBP4
Rraga
mtg2
rab6b
dnajc27
CRACR2A
sept12
gnl3l
arl3
-
noa1
RAB19
-
rab23
rab9b
-
DRG2
si:ch211-11k18.4 (1 of many)
si:ch211-11k18.4 (1 of many)
-
gnl2
-
-
-
sept2
eefsec
EHD1
rab12
nkiras2
rab34a
rab33b
arl13a
-
mtg1
Rab1A
cracr2ab
RAB31
sept7a
rab6b
ehd4
RAB20
ola1
rab15
rabl6
sept6
Arl4d
rab41
-
-
arl3l1
-
IRGC
-
-
rab11bb
si:dkey-98f17.5
rab5c
-
RAB15 (1 of many)
-
-
GUF1
arl11
rab1ab
mfn2
rab39b
eif5b
sar1b
Rab30
sept3
mfn1b
arl5a
Rab11a
arl4ab
-
rab6a
arl8bb
-
IRGC
zgc:101559
zmp:0000000951
RAB7A
hrasb
gtpbp6
rab36
Sept9
DRG1
arl5c
rab5a
arf3b
gnl3
gtpbp8
-
-
-
ehd2a
gfm2
arl4a
rab39ba
ARL6
-
arfrp1
rab34
rheb
rab35
SAR1B
sept5a
si:ch211-197g15.6
rab11b

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.