Astatotilapia_callipteraFamily: MMR_HSR1 Number of Genes: 309
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
sept9a
lsg1
arl13a
arl8
-
-
-
arl5c
hrasb
RAB17
si:dkey-98f17.5
-
dnm1l
-
sept6
rab11a
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
gtpbp6
arfrp1
nkiras2
rab5c
rab23
-
eef2b
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
si:dkey-37o8.1
-
-
-
mtif2
rab32b
dnajc27
-
sept15
mfn2
-
-
rab9b
-
-
-
-
-
-
-
-
rab34a
-
-
-
-
-
-
-
-
-
rab11ba
-
-
-
eif5b
-
-
-
-
-
-
-
-
-
arf5
rab33ba
rab34b
-
-
-
-
-
sept9b
mtg1
eral1
-
-
-
-
-
-
rab9a
sept8b
rab11bb
sept4a
sept7b
gnl3
rab42a
CRACR2A
ehd3
rab1ab
rab12
si:ch211-11k18.4
-
-
-
-
-
-
arl1
sept5b
-
-
-
-
RAB29
-
-
rheb
arl3l2
si:cabz01085950.1
-
-
-
-
-
zgc:153654
sept2
RAB39B
OLA1
-
-
-
-
-
rabl3
-
-
-
rab25b
rab11al
-
rraga
hbs1l
-
-
-
ola1
sept5a
zgc:63587
rab18a
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
arl8a
sept8a
gtpbp3
-
-
-
-
drg2
-
sar1ab
-
-
arl8ba
rab1ba
-
cracr2b
-
arl4cb
RAP2B
-
sar1b
-
-
rab18b
-
-
noa1
-
ehd1a
rasl11b
-
-
-
-
-
-
-
-
-
-
-
-
srprb
-
-
-
-
-
-
ehd4
-
-
-
-
-
-
-
gtpbp10
-
-
-
-
-
-
-
-
-
-
-
-
-
rasef
nkiras1
rab5aa
rab25a
-
-
-
drg1
-
-
URGCP
-
si:dkey-16l2.16
-
-
RAB7A
-
-
rasl11a
mfn1b
rab41
-
arl5a
-
SEPT4
-
zgc:162879
ehd2b
si:dkey-13a21.4
gnl3l
arl2
rab22a
rab33a
-
-
arl8bb
-
-
-
-
-
-
arf2b
-
-
-
guf1
si:rp71-84d19.3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
rab30
-
-
-
-
-
-
-
-
-
-
cracr2ab
-
-
-
-
-
-
-
zgc:113625
arl13b
-
-
eefsec
ARL6
SRL (1 of many)
-
-
-
-
-
-
-
-
arf3b
arl4d
rab6ba
rasl10a
gnl1
-
rabl2
-
-
gtpbp4
rab15
rab6bb
-
-
-
-
-
-
arl14
-
zgc:101559
-
arl3
gfm2
KRAS (1 of many)
-
-
-
-
KRAS (1 of many)
srl
-
-
-
-
-
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.