Danio_rerioFamily: MMR_HSR1 Number of Genes: 274
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
si:ch211-197g15.6
zgc:101559
rab23
eefsec
rab20
gfm2
hrasb
gnl3
drg2
arl8ba
rab5ab
ehd3
arf1
si:ch211-197g15.6
-
sept4a
sept6
CABZ01073795.1
kras
rab34b
MFN1
-
arl13b
zgc:55558
sept5a
rab36
sept8b
rab11al
mxe
arf2a
ehd1b
irge1
dnm1l
lsg1
arl3l2
rasl11b
si:dkeyp-75b4.9
-
rab22a
arf2b
eif5b
zgc:63587
rab3da
zgc:152658
rab5aa
arl5a
gtpbp3
gtpbp4
sept12
rab39ba
zgc:162239
sept9a
rab2a
rab7a
gnl3l
rab7b
mxc
AL935186.1
-
si:dkey-13a21.4
rab15
sept2
guf1
rab1ab
si:dkeyp-9d4.2
rab41
sept3
srprb
rab6bb
arl6
sept8a
arl4cb
zgc:171927
arl4ab
sar1ab
rab42a
rab6ba
rab13
si:ch211-254c8.3
-
ehd2a
rab14l
eef2l2
arl5c
sept5b
rab39bb
arl11
hbs1l
arf3b
rab30
si:dkey-16l2.16
nras
drg1
si:ch73-308m11.1
CR855393.1
-
gtpbp10
ehd2b
BX004816.1
rabl3
si:dkey-125e8.4
rab11a
rab11ba
eef2a.2
eef2a.1
ola1
rab9a
arl4d
rab34a
cracr2ab
arf4a
rasl11a
rab1aa
rab33ba
arl13a
nkiras2
sept7b
CR933791.2
CU550714.1
-
zgc:153642
rab25b
si:dkey-187j14.4
zgc:113625
ehd4
si:ch73-285p12.4
-
rab18a
zgc:152753
rab1bb
arf2b
-
zgc:110197
rab33a
arl4ca
arfrp1
rab1ba
rab35b
rab25a
eral1
zgc:195075
zgc:153654
gtpbp6
gnl1
rasl10a
irgf3
si:ch73-171o20.1
CABZ01059392.1
-
mtif2
arl14
rabl2
si:ch211-214j24.15
mtg2
CRACR2A
si:dkey-98f17.5
mtg1
arl2
si:ch211-113e8.5
irge4
arl8bb
arf5
arf3a
irgf1
opa1
zgc:195077
dnajc27
si:ch211-197g15.7
si:ch211-197g15.10
arl3
si:dkey-37o8.1
zgc:171452
zgc:162879
si:dkey-1c7.3
ARF5 (1 of many)
rab14
si:ch211-113e8.6
-
GTPBP8
zgc:172090
si:dkey-79f11.5
zgc:172075
rasef
si:ch211-285c6.1
zgc:172131
si:dkey-201l21.4
-
si:dkey-88j15.3
rabl6b
zgc:172065
zgc:194443
arl8a
si:dkey-73p2.3
-
mfn1b
si:dkey-73p2.2
si:dkey-88j15.4
-
mfn2
si:ch211-229i14.2
-
si:ch211-282j17.13
irgq1
BX004816.2
-
zgc:100918
zgc:66473
zgc:66473
sept7a
si:dkey-30g5.1
-
si:ch211-11k18.4
CABZ01059403.1
-
zmp:0000000951
rab12
rab11bb
si:dkeyp-67a8.4
FP102786.1
irgf2
-
si:dkey-79f11.7
-
CABZ01000634.1
si:dkeyp-67a8.4
si:dkey-193b15.5
LO018605.1
-
si:dkey-175d9.2
si:dkey-79f11.10
arl8
si:ch211-197g15.6
si:ch211-197g15.8
si:dkey-73p2.3
-
si:dkey-79f11.9
si:ch211-285c6.4
si:dkey-79f11.8
-
si:dkey-73p2.1
gnl2
rab18b
hrasa
ehd1a
si:dkey-185m8.2
CABZ01081908.1
-
CABZ01049362.1
-
nkiras1
BX569789.1
si:ch73-170d6.2
arl4aa
si:ch1073-185p12.2
CT955963.1
-
eef2b
irgf4
-
zgc:171695
-
arl1
CABZ01072548.1
CR391937.1
-
CU571310.1
CR626941.1
-
sept15
noa1
zgc:172091
rab9b
sar1b
rab6a
si:ch1073-181h11.2
-
sept9b
megf8
-
FO681314.1
-
CABZ01049361.1
srl
BX004857.1
-
si:ch211-282j17.12
SEPT4
si:dkey-88n24.11
CR855320.3
FO680692.1
-
AL953865.1
-
FO905027.1
-
arl3l1
BX005442.2
-
BX321875.3
-
CR394546.4
CABZ01072309.1
si:dkey-30g5.1
-
zgc:77650
CABZ01035356.1
rab3b
CABZ01059407.1
-
zgc:101806
si:dkey-30g5.1
-
LO018551.1
BX005442.3
-
CABZ01059408.1
-
FP326649.1

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.