Seriola_dumeriliFamily: MMR_HSR1 Number of Genes: 241
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
ehd2b
-
-
-
-
arl8a
arl4aa
mfn2
CRACR2A
arl13a
gnl3
si:rp71-84d19.3
-
-
-
-
-
-
-
-
-
-
-
drg2
rab33ba
gtpbp10
-
-
gtpbp6
-
sept5a
-
-
sept9a
rab11a
-
zgc:63587
-
-
rab11ba
dnajc27
mfn1b
rab9a
-
-
-
-
-
-
-
rab18a
arl3l2
rab36
-
-
arl11
zgc:171927
sept3
rab14
-
lsg1
RAB15
rab1ba
-
-
-
rab35b
opa1
-
-
-
-
-
-
-
-
arf5
-
-
rab20
-
-
-
-
arl13b
sept6
rab15
si:dkey-16l2.16
eif5b
-
-
rab18b
-
sept8b
rab25b
rab11al
-
gtpbp4
RAB29
rabl6b
sept5b
RAB17
ARL6
-
arfrp1
rhebl1
ARL5B
arf3b
rab9b
arf2b
eefsec
-
zgc:101559
rab12
-
rheb
SRL (1 of many)
-
si:dkey-37o8.1
-
-
-
-
rab6bb
-
-
-
rab25a
rab5aa
-
-
-
-
-
gnl2
gtpbp3
sar1ab
srl
ehd3
arl4d
rab34a
ehd4
rasl10a
-
-
-
sept2
zgc:162879
nkiras1
sept7b
rab42a
rabl3
arl5a
arl8bb
zgc:153654
arl4cb
hbs1l
-
-
gnl3l
cracr2b
rab30
guf1
-
-
-
si:dkey-98f17.5
-
rab11bb
ola1
rab2a
gnl1
arl1
-
rab33a
arl3
si:cabz01085950.1
-
RAP2B
-
rraga
-
rabl2
rasl11a
eef2b
noa1
-
-
rasd4
si:ch211-11k18.4
ehd1a
-
-
-
-
-
-
-
-
-
-
rab34b
-
-
-
-
-
-
-
drg1
-
-
-
rab1ab
-
-
-
-
-
-
eral1
rab22a
-
-
-
kras
-
-
sept4a
si:dkey-110g7.8
-
sept12
srprb
RAB6B (1 of many)
-
-
hrasb
-
sept8a
-
si:dkey-13a21.4
si:dkey-32e23.4
-
-
-
-
-
SEPT4
-
sept9b
-
-
-
-
-
sar1b
-
-
arl8ba
gfm2
-
-
-
-
-
-
-
-
arl2
OLA1
-
-
-
-
mtif2
rab6ba
rasef
-
-
-
-
-
RAB1A
arl5c
mtg2
dnm1l
nkiras2
rasl11b
rab5c
-
-
mtg1
-
-
-
rab23
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.